Insertion junction: CLIP2.023906_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023906
Chromosome:chromosome 17
Location:5616360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739950 (1 of 1) PF01612//PF13086//PF13087 - 3'-5' exonuclease (DNA_pol_A_exo1) // AAA domain (AAA_11) // AAA domain (AAA_12) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCTGCACCAGCAGCACGTGCGGCCCCGCGCACAGCTGCACCACCGCC
Internal bar code:TGCAAGGAGGCGGGGCACGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:4850
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:CACACTTAGTGGCTCCTGGG
Suggested primer 2:AAGATGTCGAACAGCCCCAG