Insertion junction: CLIP2.023915_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.023915
Chromosome:chromosome 3
Location:1587255
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152450 (1 of 1) PTHR23308:SF2 - KANADAPTIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGTGCGCCCGGAGCTGCCTTGTCAGGACCAGGGCCTGCGGCTGCCGC
Internal bar code:CAAGACAGCACGTGTTATCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:971
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTTGTTGGTGCTGTGTG
Suggested primer 2:AAAGCCCGAGCCTCCTAAAC