Insertion junction: CLIP2.023917_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023917
Chromosome:chromosome 7
Location:984293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319320 ACD2 1-aminocyclopropane-1-carboxylate deaminase; (1 of 1) PTHR10314//PTHR10314:SF79 - SER/THR DEHYDRATASE, TRP SYNTHASE // DOF-TYPE TRANSCRIPTION FACTOR TMO6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTCGGCACACGTGCGCGGTTGCATTGTCTTCCAAGGCTCAATGGCGT
Internal bar code:TAGTGGCGGGTGTGCGGTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:803
LEAP-Seq percent confirming:26.3158
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTTAGGCTGAAGGGCATGGG
Suggested primer 2:TGGTTACCTGCGTGTGAGAC