Insertion junction: CLIP2.023922_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023922
Chromosome:chromosome 12
Location:9563889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g539900 (1 of 1) K00166 - 2-oxoisovalerate dehydrogenase E1 component alpha subunit (BCKDHA, bkdA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACGGGATGGAGGGAGGGGGGAGCGAGGCAGGCACGACTGGCTGTACA
Internal bar code:CGACGTACTCTTGTCGTGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:686
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTACGGGCAGTGTACAA
Suggested primer 2:CATCTATCCCTGCGAACCCC