Insertion junction: CLIP2.023924_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023924
Chromosome:chromosome 3
Location:6788821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196950 (1 of 4) PTHR16222//PTHR16222:SF17 - ADP-RIBOSYLGLYCOHYDROLASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAACCTAGACCCAGACACACTACTGGCCTACCAATGCCTGCACCCCG
Internal bar code:CTGGGGAGGGGGTGATCGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5650
LEAP-Seq percent confirming:89.8876
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACTCACACCCGTACGTG
Suggested primer 2:CAACTCTTGTGCACCACGTG