Insertion junction: CLIP2.023929_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023929
Chromosome:chromosome 7
Location:3702378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337750 EBM5 (1 of 3) PTHR31451//PTHR31451:SF1 - FAMILY NOT NAMED // MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED; Mannan endo-1%252C4-beta-mannosidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGATGTCACACACACACACACACACACACACACACACACACACACAC
Internal bar code:GTGTTCGTGGTGGGTCACTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1351
LEAP-Seq percent confirming:59.375
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCATACCGCCTGTGTCT
Suggested primer 2:GCTGGAGCTACTGTGTGTGT