Insertion junction: CLIP2.023930_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023930
Chromosome:chromosome 7
Location:5271723
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349540 (1 of 1) PF07714//PF13857 - Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (many copies) (Ank_5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGCAGCAGTCAGCCTCCACCGCTGTCGCCGCAGCCGCGAGCCGCGC
Internal bar code:GGTCGGCTTGGAACGGTAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2608
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGCTCTCCCATGCACTTG
Suggested primer 2:ATTGAAAGTGAGGCCGTCGT