Insertion junction: CLIP2.023940_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023940
Chromosome:chromosome 14
Location:3434578
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630150 (1 of 1) PTHR10131//PTHR10131:SF52 - TNF RECEPTOR ASSOCIATED FACTOR // TNF RECEPTOR-ASSOCIATED FACTOR FAMILY PROTEIN DDB_G0268444-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCGGGGCATCATGGGGCAGAAGAAGTGTGTCGCCGTGCATTGGCACG
Internal bar code:AAGTGTCCGACAGATCACAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1312
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGGAAGGTGGGGGTTACA
Suggested primer 2:GGCACACATGATGGACCTGA