Insertion junction: CLIP2.023941_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023941
Chromosome:chromosome 3
Location:4133583
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172750 (1 of 1) IPR002893//IPR012677 - Zinc finger, MYND-type // Nucleotide-binding alpha-beta plait domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTGCAGGCTGCAGCTCCCGCAGCCACACACGAAGGTCGCGGGCGGGT
Internal bar code:ATTTGCGGGGACTTGGGCAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1821
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTATGCCTGCCAGTTGTC
Suggested primer 2:GGTCCAGCTGTTTGCACTTG