Insertion junction: CLIP2.023942_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023942
Chromosome:chromosome 3
Location:4003220
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171650 HEL16 (1 of 2) PTHR18934:SF145 - ATP-DEPENDENT RNA HELICASE DHX57-RELATED; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATGCATCCTCTACCGCTTTACCAACCATCTTTGCAACTCCCCGCCCT
Internal bar code:CGTGTTTCGAGAGAAATGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:509
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGAGGGTGAAAGTGCGTG
Suggested primer 2:AATGGTGCTACAGCCACAGG