Insertion junction: CLIP2.023954_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023954
Chromosome:chromosome 16
Location:6367868
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g675600 (1 of 5) IPR000104//IPR001214 - Antifreeze protein, type I // SET domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGGCCGAGAGCGTGCAGGACGGGCATGCTGACCCCGACGGGTTCCGG
Internal bar code:CTCTAATGGAAAGAAGAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1203
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTGCTCTTGCGTATGAA
Suggested primer 2:AGCTGTACCTCACACGTGTG