Insertion junction: CLIP2.023964_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023964
Chromosome:chromosome 1
Location:2624599
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015600 (1 of 1) PTHR23346//PTHR23346:SF7 - TRANSLATIONAL ACTIVATOR GCN1-RELATED // TRANSLATIONAL ACTIVATOR GCN1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACGCTACAGAGAGATTCGCTGACAACGCTAGCGCCTCCTTTGGGGGT
Internal bar code:CACAGTGTGCACCTTTATCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2414
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAAGAGCCGCAACGCAAT
Suggested primer 2:TGAACAACCACCTGGACGAG