Insertion junction: CLIP2.023978_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.023978
Chromosome:chromosome 7
Location:471041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315500 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGATGCACGCACCTTGAGCGCCAGCTGCGCAAAGGTCTGGTCCGTGAA
Internal bar code:TGTTATGCATTAAGTGGGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1065
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACTGCAACTTGACCCCA
Suggested primer 2:GTGATGGTGGTGATCGTGGT