Insertion junction: CLIP2.023978_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023978
Chromosome:chromosome 12
Location:3538522
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496400 (1 of 2) 2.7.7.52 - RNA uridylyltransferase / TUT 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGGTCACTGTGCTAGCGCTGCGAGACGTTGTCGTCCGCATCTTGTTT
Internal bar code:TGCGGGTGTATAGTCTTAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2194
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCGTCGGGTATCTACACC
Suggested primer 2:GTTCACTTGCAAGGCTGGTG