Insertion junction: CLIP2.023987_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023987
Chromosome:chromosome 11
Location:4136344
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481250 (1 of 1) PTHR10992//PTHR10992:SF699 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGAGCGCGCGCGCGCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Internal bar code:TGGTCCCTCGTGTGTGTTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:674
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGGAGGGTAGGAGGGTC
Suggested primer 2:ATTCCAGCCCAAACTAGCCC