Insertion junction: CLIP2.024003_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024003
Chromosome:chromosome 7
Location:1722842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325716 DIV146,DNL1,LIG1 DNA ligase 1; (1 of 1) K10747 - DNA ligase 1 (LIG1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGGTATGGCAGCCTGATGTGTGTGCAGGCGGTGCGGTAGGTGGTGC
Internal bar code:TTCGACTGTCTAACATAAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:230
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTGAACTTCTCCAGCAC
Suggested primer 2:AACGAGGCCAGCATCAAGAA