Insertion junction: CLIP2.024004_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024004
Chromosome:chromosome 9
Location:4463621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400738 (1 of 1) PTHR23012//PTHR23012:SF96 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCCTCGTACTGCTCGCGCCGGGCCTGGCGCGCCGCGATGCGCATGA
Internal bar code:AGAGTAGGTTATGCGAAGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3407
LEAP-Seq percent confirming:90.2778
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCTGTTCCTGTTCTGGA
Suggested primer 2:GAGTACCAAACCCCAGTCGG