Insertion junction: CLIP2.024007_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024007
Chromosome:chromosome 10
Location:2882733
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g439650 COG8 (1 of 1) PF04124 - Dor1-like family (Dor1); Component of oligomeric golgi complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAATACTCAGCTCCCCGGGCCCCCAGCCCTAGCACTTGTTGGCCTAA
Internal bar code:CTTATACGTATCTGGGCTGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1097
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCGCGATGTCATTTTGTT
Suggested primer 2:CTCCAGCAACTCCATCAGGG