Insertion junction: CLIP2.024008_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024008
Chromosome:chromosome 16
Location:6170140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677000 HSP70E,GEX27 (1 of 1) K09489 - heat shock 70kDa protein 4 (HSPA4); Heat shock protein 70E intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGAAGCGCTCGCGGCGCCCCGTCCCCTGGGCTTCGCCGCCGCCTGGCT
Internal bar code:TAGGCATCATGCGGTACACCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2019
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAGAGCAAGCGTGAGAC
Suggested primer 2:CTGCGGGTCCTTGAACTTCT