Insertion junction: CLIP2.024025_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.024025
Chromosome:chromosome 12
Location:7828287
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g553850 TUL1 (1 of 781) IPR000104 - Antifreeze protein, type I; Tubulin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACGCTTGTCTTCAAATGTTATTGTGTGCGTCTCCTTGTGTGCAGGTGC
Internal bar code:GATTTCGGACCATTGGTTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1673
LEAP-Seq percent confirming:77.2727
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGGCTCCTGACTTTGGG
Suggested primer 2:CAGTTGATAATGCTGCCGGC