Insertion junction: CLIP2.024046_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024046
Chromosome:chromosome 6
Location:1561812
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261050 (1 of 28) 2.7.7.6 - DNA-directed RNA polymerase / RNA polymerase III CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCCAGTGGAGCGCATCCAGCCGCAGAACCAGGCGGCGCAGTTCGTGA
Internal bar code:AGACACTTGATATACTGTCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:128
LEAP-Seq percent confirming:61.1111
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CATCACGTACCTGATCGCCA
Suggested primer 2:CTCATTCAACCGCCCTTCCT