Insertion junction: CLIP2.024047_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024047
Chromosome:chromosome 6
Location:3048988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274800 HTA4,HTA26 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGGCAAGAAGGCCGTGAGCCGCAGCGCCAAGGCCGGCCTGCAGTTCC
Internal bar code:CAGTGTTATAGCGTCAGAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3036
LEAP-Seq percent confirming:94.1667
LEAP-Seq n confirming:113
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATACCGGAGCCAGGTTT
Suggested primer 2:GCTTAGCCCGAGGTGAACTT