Insertion junction: CLIP2.024053_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024053
Chromosome:chromosome 5
Location:504238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244200 TMA1,COTH2 spore coat protein H; (1 of 3) PF08757 - CotH protein (CotH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTCAGCACCCACACCCAACTTCCAACCACACAAACCGCACCTGCAGC
Internal bar code:GTCAAGACAATCAAGCGGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:820
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTCAGCAAGAAAGCCCC
Suggested primer 2:ACGCTCCCATTCCACCATTT