Insertion junction: CLIP2.024056_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024056
Chromosome:chromosome 3
Location:4017594
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171700 (1 of 1) 1.2.1.50 - Long-chain-fatty-acyl-CoA reductase / Acyl-CoA reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTCGTATTTAGAGCGGGATGGTAGAAGTGGTCGTGTGTGACCATGCC
Internal bar code:TTATTATATAGAAACGGGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:175
LEAP-Seq percent confirming:35.2941
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGAAAGAGAGAGGGGGAT
Suggested primer 2:CTCGCTCTCCACACCCATAC