Insertion junction: CLIP2.024059_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024059
Chromosome:chromosome 1
Location:5883941
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800103 (1 of 1) PF09749 - Uncharacterised conserved protein (HVSL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTCTCAGCCTATCGGTAGTAAAGCGCGCGTGGAACACGGAAGGGGCG
Internal bar code:AATTATTCTTAGTTTGGCCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:364
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGGGAGTATGAGGTGTG
Suggested primer 2:GCGTATTGTGGCGTCATGAC