Insertion junction: CLIP2.024079_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024079
Chromosome:chromosome 16
Location:2510537
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g660601 (1 of 1) IPR000772//IPR003609 - Ricin B, lectin domain // PAN/Apple domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATCTGTGTACGGCACTGTGTGCGTGGCTCGCAAGGTTTAGCAGGACT
Internal bar code:AGGAGTGTCGGTATGGGCTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:507
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCCGCTTTCTTGAATGG
Suggested primer 2:GGTTGTGTCCACATTGGTGC