Insertion junction: CLIP2.024081_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.024081
Chromosome:chromosome 10
Location:5286020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801179 (1 of 1) IPR001584//IPR012337//IPR016197 - Integrase, catalytic core // Ribonuclease H-like domain // Chromo domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTAAAAGTCACGGCACGGCGGTGTCGGTCTGCATCTTGGCGGGCGCG
Internal bar code:GAACTGATACCTTGTGTCTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1964
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCCTATCCCGGAACTAC
Suggested primer 2:AGGCATCAATCAAGGTGCGA