Insertion junction: CLIP2.024084_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024084
Chromosome:chromosome 6
Location:4667827
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278550 (1 of 3) PTHR12385//PTHR12385:SF44 - CTL TRANSPORTER // PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCTGCACCGTGTGTGCGCCCAGCTGCCCTGCTGCATGGCCGCCAACG
Internal bar code:GTAGTGTCGCGGGTGCGTTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5592
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:136
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:136

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGTCCTGCCCTGACACTG
Suggested primer 2:CAATGTGCACTTGATGGGGC