Insertion junction: CLIP2.024098_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024098
Chromosome:chromosome 9
Location:2503192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393000 CSR6 (1 of 6) 2.8.2.8 - [Heparan sulfate]-glucosamine N-sulfotransferase / PAPS:N-desulfoheparin sulfotransferase; Carbohydrate sulfotransferase-related 6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTCGACCCATGCCCCAGGCCTGTCCGCGGCCGAAAGCTCGCCTGGCC
Internal bar code:AAGGAAGTAGGTGCCTGAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:551
LEAP-Seq percent confirming:20.3125
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCTATTGTTCGCGCTCC
Suggested primer 2:TGGGGTGGAAGACGATGTTG