Insertion junction: CLIP2.024120_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024120
Chromosome:chromosome 16
Location:7686399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGAAGGCACGGCTTAGGCGGTTTTCGTGTCAGCCGTTGACACGCAGGT
Internal bar code:AATTGATATCCGGACTGAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5245
LEAP-Seq percent confirming:65.9341
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:ACGATGGAGGTGGAGGAGAA
Suggested primer 2:TGCTTGTGGTGAGCATACGT