Insertion junction: CLIP2.024131_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.024131
Chromosome:chromosome 4
Location:3772939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00096397

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTTTCATGACCGAACCCCACTTCTGGTCGTATGTGCAGGATCCATCGT
Internal bar code:TCCTTCGAAACCGGCGATTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4351
LEAP-Seq percent confirming:90.1099
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCGCGTTACATGCACAT
Suggested primer 2:GGTTGAAACAACATGGGGGC