Insertion junction: CLIP2.024134_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024134
Chromosome:chromosome 3
Location:5204018
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181650 (1 of 1) PTHR20973//PTHR20973:SF0 - NON-SMC ELEMENT 1-RELATED // NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 1 HOMOLOG CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGGCTGATGGGTACAAGAAGGAGCAGGAGGTGAAGGTAAGTTTCGTG
Internal bar code:TTAGCGGTTACTTGTGCAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2250
LEAP-Seq percent confirming:85.1852
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCAGTCCCTGACCACAT
Suggested primer 2:GCCATGGCTGTCAATTGCAA