Insertion junction: CLIP2.024138_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024138
Chromosome:chromosome 14
Location:1526864
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617800 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCGGGTTCAGCCGTAACCCCCCCCCTGCATGAGCATCACGAAGGGGC
Internal bar code:GCCAAGCAGGTACTAGGTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1245
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ACGATTGTGGCCATGACCAT
Suggested primer 2:GTGTTAAAGGCCCCCGAGAA