Insertion junction: CLIP2.024138_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024138
Chromosome:chromosome 14
Location:1526867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617800 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGCCCCGCATGCGGGGGCGCTGTATGCACGAACCGACGACGCTGTGT
Internal bar code:CCGTACTCTAGAAATAACTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1599
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTAAAGGCCCCCGAGAA
Suggested primer 2:ACGATTGTGGCCATGACCAT