Insertion junction: CLIP2.024156_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024156
Chromosome:chromosome 11
Location:1959778
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467778 (1 of 1) K00761 - uracil phosphoribosyltransferase (upp, UPRT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCCTGGGGTGGGAACCGGCATCTGACAAGGTGCCAGTGGTTGTGTGC
Internal bar code:AGTTGTCCAGGGTAAACTACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:157
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGATATCAGCCCCAACCCCT
Suggested primer 2:CATGTTCACCCCTCCCTGAC