Insertion junction: CLIP2.024158_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024158
Chromosome:chromosome 9
Location:2105795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396100 PHC15,EZY16 Pherophorin-chlamydomonas homolog 15; (1 of 71) PF12499 - Pherophorin (DUF3707) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCATGAATGCGCGCGCCAGCTGGCCCCAGTTAGCCCCGCTGGCAAGC
Internal bar code:CTACCTCGTCCTGTAAGGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1819
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTGCGACCAACAACTAT
Suggested primer 2:TACCTTACCCTGTCCCCTCG