Insertion junction: CLIP2.024167_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.024167
Chromosome:chromosome 16
Location:5790713
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680200 (1 of 1) PTHR31419//PTHR31419:SF1 - FAMILY NOT NAMED // AUXIN EFFLUX CARRIER FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCGGCCCGCCGCTTGGAGCTAAATTTGCAAGCCCCTTCATGGAGCTT
Internal bar code:GGTGGTTCTACGCTGAACAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1719
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGGTCGGACTGTCCCTT
Suggested primer 2:TCGCGCGTGCTTGATAAATG