Insertion junction: CLIP2.024171_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024171
Chromosome:chromosome 3
Location:5357448
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183250 (1 of 1) IPR027437 - 30s ribosomal protein S13, C-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCTGCGCTTGCGGTTATGATGAGAACGGAGCGTTCTGGAAGTTCAAT
Internal bar code:CAAGAGACCTTGCGGTTAACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1738
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTGATGTCGTGCCGAAA
Suggested primer 2:TAAGTCTGGTGCATGGCAGG