Insertion junction: CLIP2.024172_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024172
Chromosome:chromosome 2
Location:2492895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g092000 DEG2 Deg protease; (1 of 5) 3.4.21.108 - HtrA2 peptidase / Serine proteinase OMI intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATGGCAGAAGGAGGCGTAAACAACAGCGCACATCTCTAGCAGGTGCA
Internal bar code:TATATGTCATCGCATTTCTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1027
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCGCGCTACTTCATCTAC
Suggested primer 2:AGCCATCGATCAGCAGGATG