Insertion junction: CLIP2.024185_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024185
Chromosome:chromosome 2
Location:1880383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g087551 (1 of 1) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGCGATCTCGGCAGCGGCTGCAGCCTCCGCAGCAGCCGTAGCAGCC
Internal bar code:TGCTAGCTACAACCATATTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:913
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTAGGGATGCTGCGATGG
Suggested primer 2:CTTGATCCAACGCCTCAGCT