Insertion junction: CLIP2.024187_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024187
Chromosome:chromosome 3
Location:1344700
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150700 (1 of 2) PTHR22904:SF312 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACCCTTGAGAGCGTGTGGACACTAATCCCCCCTCGAGGTTAGAGTAG
Internal bar code:ACGAGGGTAAATCTGTGCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3565
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCGCCAGTACGTCTGAAA
Suggested primer 2:TCATATGACCGGGTGTCCCT