Insertion junction: CLIP2.024187_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024187
Chromosome:chromosome 3
Location:1344704
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150700 (1 of 2) PTHR22904:SF312 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCATGTGCTCACGGTACCGTGAGGCCCAGGCACTCCTACGATTCCTA
Internal bar code:ACGAGGGTAAATCTGTGCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1381
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCATATGACCGGGTGTCCCT
Suggested primer 2:AAGCGCCAGTACGTCTGAAA