Insertion junction: CLIP2.024188_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024188
Chromosome:chromosome 17
Location:5607652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739900 (1 of 1) IPR012337//IPR027417 - Ribonuclease H-like domain // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCGCGCGGCGGTTGCGGCTGTGCCTCCGCCGGCGACGCAGCTGCCGA
Internal bar code:AGTTCATCTGAGAAGGCCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4688
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGATGATTAGGTCCACGG
Suggested primer 2:CGTGACCTACCCGTGACAAA