Insertion junction: CLIP2.024198_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024198
Chromosome:chromosome 9
Location:5399310
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00158078
lncRNA_TCONS_00159407

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGTTTGCCCTGCCGCCTGCCTGCGCTTTGCACGGGGTCCCGATACGGT
Internal bar code:ACAAAGACGGCTAAGGGGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1719
LEAP-Seq percent confirming:87.234
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGCGCCTCCATTTACCA
Suggested primer 2:GCGACCCTGTCTACGATGAG