Insertion junction: CLIP2.024204_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024204
Chromosome:chromosome 5
Location:3607100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234350 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTATACACCAGGGACGTGCCTCTCATGCCCAATCGCACAAACCAGGCCC
Internal bar code:TCCCCTCATTCTGTATAGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2470
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCACGGAGTCGCAGTTTA
Suggested primer 2:AGGGCTCCGAACATGTCAAG