Insertion junction: CLIP2.024206_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024206
Chromosome:chromosome 17
Location:4095361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728900 FSA1,TAL3 (1 of 1) PTHR10683//PTHR10683:SF2 - TRANSALDOLASE // SUBFAMILY NOT NAMED; Transaldolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGTTTGAGGGTTGAGGATGGGGGTTTGAGGGTTCCAGGCATGACTA
Internal bar code:GCGCCCTCAACCGACTTTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:947
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTTGACACGCACTCTTC
Suggested primer 2:ATCGGTCACGCGAGAATCTC