Insertion junction: CLIP2.024212_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024212
Chromosome:chromosome 2
Location:6679204
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387134 (1 of 3) PF04379 - Protein of unknown function (DUF525) (DUF525) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCGCTCGCAAGGTGCAGCGCGACGCTGGCGACGCACTGAAACCCTGT
Internal bar code:GTCGAGGGTTGGGCGAGCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2595
LEAP-Seq percent confirming:90.8257
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCACCTCGTAGGCTCCTT
Suggested primer 2:CACGTATTCAGCATGCACCG