Insertion junction: CLIP2.024214_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024214
Chromosome:chromosome 6
Location:4090086
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278226 (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGAGCGCGAAGCCCACGAAGATGACTGACAGGAACAGGAAGAACAGCA
Internal bar code:AGGAGCGAGTGATGTTCGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2412
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTTTGGAGCGAGGGAGG
Suggested primer 2:GTCTCGCTCTCCACGATCAG