Insertion junction: CLIP2.024216_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024216
Chromosome:chromosome 3
Location:3107487
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164450 (1 of 100) IPR001810 - F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGTGTGTGGTGTGGGTGCTGTTGGTGGAGTGGGTTCTGTGGGTGGTG
Internal bar code:AGGAGTAATGCGGCTGTGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1320
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGCTCTAGTTGGGTGAC
Suggested primer 2:CAGACCTGCTGCTACGCATA