Insertion junction: CLIP2.024218_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024218
Chromosome:chromosome 4
Location:1620149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213000 MAE12 (1 of 5) PTHR11206:SF94 - DNA-DAMAGE-INDUCIBLE PROTEIN F; MATE efflux family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGCGAAACAGTCTGACTGTCAGCCGCCCCTACTTCCGGCTAGCGATA
Internal bar code:ATCGGTATGAACCCAGGTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2500
LEAP-Seq percent confirming:13.7931
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:75
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTTTACTCGCACCGACA
Suggested primer 2:GGGGAGTGTTAAAGCGCTCT